Synthesis of Novel Protein Tyrosine Phosphatases 1b inhibitors

2, 5-disubstituted oxadiazole

 

Ghanshyam B. Jadhav1*, C.L. Athare2, Ravindra B. Saudagar1

1KCT’S RGS College of Pharmacy, Anjaneri, Nashik, Maharashtra, India

2SNJB’s SSDJ College of Pharmacy, Neminagar, Chandwad, Nashik, Maharashtra, India

*Corresponding Author E-mail: aaryajadhav@rediffmail.com

 

ABSTRACT:

Protein tyrosine phosphatases (PTPs) catalyze the dephosphorylation of tyrosine-phosphorylated proteins and are negative regulators of tyrosine kinase receptor mediated signaling. PTP1B directly interacts with both the IR and IGF-1R. The importance of PTP1B inhepatic metabolism has been demonstrated in vivo and incellular models. Mice lacking the ptpn1 gene exhibit increased insulin sensitivity owing to enhanced phosphorylation of IR in liver and skeletal muscle, resistance to weight gain on a high-fat diet, and an increased basal metabolic rate. So it is a potential therapeutic target for insulin resistance associated with obesity and type 2 diabetes. To date, studies of PTP-1Bhave been limited by the availability of specific antagonists. Here we investigate a series of 2, 5-disubstituted oxadiazole as novel PTP1B inhibitor. We synthesized few compounds from 2, 5-disubstituted oxadiazole series and screened for the PTP1B inhibition. Compound 9exhibited significant inhibitory activity against PTP1B. Compound 9 showed IC50 value of 0.46 µmol/L and favorable pharmacodynamics properties in mouse. Structure–activity relationships were explained with the help of molecular modeling approach.

 

KEYWORDS: PTP 1 B, Diabetes, 2, 5-disubstituted oxadiazole phosphotyrosine.

 


INTRODUCTION:

Type 2 diabetes (T2DM) have major health care burden around the world. In 2012, More than 371 million people were diagnosed with diabetes. Still half of people with diabetes are undiagnosed. 4.8 million People died due to diabetes. More than 471 billion USD $ were spent on healthcare for diabetes. Ninety percent of these patients suffer from T2DM, which is characterized by a resistance to insulin. This resistance to insulin is developed years before the diagnosis of T2DM. The preservation of glycemic control relies on the pancreas’s ability to overcome tissue resistance by simply increasing its production of insulin. However, the increased stress on the insulin-secreting pancreatic b-cell from glucotoxicity, lipotoxicity, inflammatory cytokines and genetic sensitivities leads to their failure. The micro and macro-vascular complication associated with T2DM are directly correlated with the magnitude and duration of the hyperglycemia1.

 

 

Major current pharmacotherapies for T2DM include sulfonylureas, metformin, thiazolidinediones (PPARγ agonist), gliptins (DPPIV inhibitors) and liragutide (GLP-1 agonist). These pharmacotherapies have their own limitations with respect to their efficacy or side effects like nausea, diarrhea, hypoglycemia, weight gain, fluid retention and cardiovascular complications 2. This makes discovery of new and safe treatments essential for T2DM. Protein tyrosine phosphatase 1B (PTP1B) contribute to diabetes and obesity 3–5. PTP1B knockout mice exhibit phenotypes of increased insulin sensitivity, improved glucose tolerance and resistance to high fat induced weight gain all without any adverse effects 6, 7.Designing selective PTP1B inhibitors is a big challenge, T-cell protein tyrosine phosphatase (TCPTP), a major hurdle in the development of safe and effective PTP1B inhibitors 8, 9. PTP1B active site contains phosphotyrosine (pTyr) containing two negative charges at physiological pH. Therefore most of the competitive PTP1B inhibitors have high charge density mimicking pTyr which limits their drug-like properties with limited cell permeability or bioavailability.

 

Over the past two decades, numerous PTP1B inhibitors have been developed while two compounds, ertiprotafib and trodusquemine, were progressed to clinical trials. However, ertiprotafib had been discontinued in phase II clinical trials due to lack of efficacy and side effect 10, 11. The further development of most PTP1B inhibitors was restricted due to their low cell permeability and poor bioavailability. Therefore, there is a need to develop novel potential drug scaffolds targeting PTP1B with desirable physicochemical properties and in vivo efficacies.

 

A focused library approach was used to identify highly potent and selective PTP1B inhibitors that are capable of bridging and simultaneously associating with both the active site and an adjacent peripheral site 12. A ‘linked fragment’ approach was employed to develop potent and selective PTP1B inhibitors that can engage both the active site and the second aryl phosphate-binding site13-15. Structure-based modeling has been used to target unique PTP1Bconformations for inhibitor development with both high affinity  and selectivity16. A secondary allosteric site has recently been described for PTP1B, and several small-molecule inhibitors that occupy this site stabilize an inactive conformation of PTP1B17. The most straightforward approach is to reduce the number of negative charges, so that a less-charged derivative might be able to penetrate the cell membrane. Another approach to increase cell permeability is to enhance the hydrophobic character of the compounds. The prodrug approach has been widely used to deliver compounds containing one or more carboxylic acid group(s). The corresponding methyl or ethyl esters are called prodrugs, and they are much easier to pass through the cell membrane. Once inside the cell, the prodrugs are hydrolyzed to regenerate the original inhibitors.

 

Compounds of the thiazolidinedione (TZD) class have aroused considerable interest as antihyperglycemic compounds and aldose reductase inhibitors 18-20. Some of these compounds (such as pioglitazone and rosiglitazone) are insulin-sensitizing agents acting as peroxisome proliferatoractivated receptor γ (PPARγ) agonists 19, and they have been shown to be effective in treating type II diabetes in clinical situation. In addition, some 2,4-TZDs have proved to be PTP1B inhibitors 21. TZD moiety and substituted biphenyl scaffold were found to be effective 22.  Here we describe our extended efforts on this SAR studies which leading to more potent PTP1B inhibitors with antihyperglycemic activity in vivo. Our goal was to discover novel, potent, cell permeable and orally bio-available PTP1B inhibitors by designing low molecular weight, non-phosphonate and mono carboxylic acid phosphotyrosyl (pTyr) mimetics inhibitors based on known literature compound (Fig. 1). IC50 0.53±0.10 (µmol/L)23.

 

 

Fig. 1 Structure of reference PTP1B inhibitor

MATERIALS AND METHODS:

General procedure for Synthesis of compounds

Synthesis of 4-bromobenzohydrazide:In 100 ml RBF, a solution of hydrazine hydrate (10 ml) and ethyl 4-bromobenzoate (2 gm) in ethanol was stirred at 90 °C for 4 hours. The reaction mixture was cooled and poured into cold water. The crude product was filtered, dried at 100 °C and finally recrystallised from ethanol.

 

Synthesis of ethyl [2-(4-bromobenzoyl) hydrazino](oxo)acetate:2-(4-bromophenyl)acetohydrazide was dissolved in tetrahydrofuran (10 mL) at room temperature. Ethyl malonyl chloride and tri ethylamine was added and the reaction stirred at room temperature for 20 minutes. Solvents were removed in vacuo to give the title compound.

 

Synthesis of ethyl 5-(4-bromophenyl)-1,3,4-oxadiazole-2-carboxylate:A suspension of ethyl [2-(4-bromobenzoyl)hydrazino](oxo)acetate in POCl3 (3 mL) was stirred at 90° C for 3 h. The resulting clear solution was quenched with ice-water, solid obtained was filtered washed with water, dried to give title compound.

 

Synthesis of ethyl 5-(Ar)-1,3,4-oxadiazole-2-carboxylate: To a stirred solution of ethyl ethyl 5-(4-bromophenyl)-1,3,4-oxadiazole-2-carboxylate and Ar- boronic acid in dioxane is added 2M K2CO3 at room temperature, then reaction mixture is purged with argon gas for 30 min,  followed by triphenyl phosphine palladium is added at same temperature and reaction mixture is stirred at 110 °C for 16 h. Then the reaction mixture is filtered through diatomaceous earth, diluted with water and extracted with EtOAc (2x30 mL). Combined organic layer is washed with water (2x50 mL) and brine solution (2x50 mL), then dried over anhydrous Na2SO4 and evaporated to give crude compound. Crude compound is purified by column chromatography (100:200 silica mesh) (eluent-5.6% EtOAc/hexane), gave a title compound.

 

Synthesis of 5-(Ar)-1,3,4-oxadiazole-2-carboxylic acid:To a stirred solution of ethyl 5-(Ar)-1,3,4-oxadiazole-2-carboxylate in ethanol (5 mL) is added 5N NaOH) at room temperature, then reaction mixture is stirred for 2 h at room temperature. The reaction mixture is evaporated under reduced pressure and the residue is triturated with ether/n-pentane (1:1) mixture and decanted. This material is dissolved in water and acidified with citric acid solution to about 5 pH. The solid precipitated is filtered and freeze dried to give the title compound as off white solid.

 

Animals

Male C57BL/6J mice were purchased from Laxmi Biofarms Pvt. Ltd. Ale Phata, Pune, India. The research work was conducted in accordance with the internationally accepted principles for laboratory animal use and care. The rats were housed under good hygienic conditions in the Animal house under standard conditions of temperature (24±1)0 C, relative humidity (65 ±10) % and 12 hrs light, 12 hrs dark cycle. The rats were fed with standard pellet diet and drinking water ad libitum. The animals were allowed to acclimatize to experimental conditions by housing them for 8-10 days prior to the experiments. All animal use was in compliance Experimental Animal Care issued by the Committee for Purpose of Control and Supervision of Experiments on Animal (CPCSEA).

 

Oral glucose tolerance test (OGTT)

Day before the study animals were randomized in different groups (Six mice per group) on the basis of body weight. Animals were orally gavaged BID with the compound-9 (0.3. 1, 3, 10, 30 and 100 mg/kg, p.o.) and rosiglitazone- 10 mg/kg, p.o. for 7 days. An oral glucose tolerance test (OGTT) performed on day 7. In OGTT assay, 16 hr fasted mice were treated with vehicle or compounds (10ml/kg, PO) after fasting blood glucose (t=−60 min) measurement. The mice were then gavaged with an oral bolus of glucose (2 g/kg). We measured the basal blood glucose level and then at 0, 10, 30, 60 and 120 min for OGTT from tail blood using glucometer (Bayer –Contour TS). The blood glucose excursion profile from 0 to 120 min was used to integrate an area under the curve (AUC) for each treatment. Percent inhibition values for each treatment were generated. Statistical analyses of the obtained data were performed using One way ANOVA followed by Dunnett’s test and Two way ANOVA followed by Bonferroni test using GraphPad prism ver. 5 software.

 

Enzyme-based assay for PTP1B

A colorimetric assay to measure inhibition against PTP1B was performed in 96-well plates. In this assay, the tested compounds were solubilized in DMSO and serially diluted for the concentrations ranging from 0.03 µM to 1000 µM. The assays were carried out in a final volume of 100 μL containing 50 mmol/L MOPS, pH 6.5, 2 mmol/L pNPP, 30 nmol/L GSTPTP1B and serially diluted compounds (2% DMSO). The catalysis of pNPP was continuously monitored on a SpectraMax 340 microplate reader at 405 nm for 2 min at 30°C. The IC50 value was calculated from the nonlinear curve fitting of the percent inhibition vs the inhibitor concentration [µM] using graph-pad prism software23results is summarized in Figure 5.

 

Structure designing of Compound

Molecular modeling was used to understand the binding mode of proposed compounds. Molecular docking study was carried out in PDB ID: 1Q1M corresponding to PTP1B. Docking was carried out in Molegro Virtual Docker (MVD)24. Figure 2 shows reference compound docked into active site of PTP1B (pdb id 1Q1M). Critical interactions seen for reference compound are; Acid group interacts with Arg 221 and Gln 266 (h-bond, with side chain), while –CO Interacts with backbone –NH of Gly 220. Substituted phenyl rings appears to have Hydrophobic interactions with Tyr 46, Val 49 &cation-pi interactions with Arg 45, Arg 47.


 

Fig. 2 The docked pose of reference compound. Binding mode evaluation in PTP1B active site (PDB ID: 1Q1M2)

 


RESULTS AND DISCUSSION:

We designed a series of 2,5-disubstituted oxadioazole molecules. These designs were prioritized based on molecular docking studies with reference compound.

 


 

Fig. 3Binding mode evaluation of design 5, 8, 3, 9, 10, 11, and 12 which Overlaid on reference (Cyan: Reference compound, Default colors: Design 5, 8, 3, 9, 10, 11, and 12).


 

Molecules prioritized based on modeling study were synthesized. Biochemical potency of these compounds was determined in PTP1B enzymes.

 


 

Reagents and conditions for General Scheme of Synthesis:

1 to 2: Nucleophilicsubstitutionreactions26,

2 to 3: Nucleophilic substitution reactions 27,

3 to 4: Acid catalyzed cyclalization27,

4 to 5: Suzuki Reaction (Coupling of aryl boronic acid and Arylhalides in presence of palladium catalyst)28,

5 to 6: hydrolysis

Figure 4. Structure of Compound 9


Fig. 5 Effect of NCE-9 on Enzyme-based assay for PTP-1B inhibition

 

Compound 9 was evaluated in vitro for their inhibitory activity against PTP1B (Fig. 5). As illustrated in Table Fig. 5, NCE-9 shows good inhibitory activity, with IC50 values 0.46 µmol/L.As compounds 9 showed good Inhibitory activities for PTP1B, we further evaluated them in mouse pharmacodynamics study

 

Fig. 6 Effect of NCE-9 on blood glucose in OGTT in C57BL/6J mice after one week of bid treatment

All values are expressed as Blood glucose in mg/dl (Mean ± SEM), n = 6. Vertical lines represent SEM. All data are subjected to Two Way ANOVA followed by Bonferroni’spost test. ###p<0.001: Rosiglitazone vs Vehicle, ^ p<0.05: NCE-9 (10 mpk) vs Vehicle, θθθθ p<0.0001, θ p<0.05: NCE-9 (30 mpk) vs Vehicle, ππππ p<0.0001, πππ p<0.001: NCE-9 (100 mpk) vs Vehicle

 

Fig. 7 Effect of NCE-9 on AUC Glucose in OGTT in C57BL/6J mice after one week of bid treatment

All values are expressed as AUC Glucose(0-120 min) in mg/dl*min (Mean ± SEM),n = 6. Vertical lines represent SEM. All data are subjected to One Way ANOVA followed by Dunnett’spost test. ** p<0.01 vs Vehicle

 

Compound 9 in OGTT significantly improved after prolonged treatment, and the area under the curve(AUC) was decreased(Fig. 7). The blood glucose level declined more rapidly than in Rosiglitazone treated mice (10 mg/kg)(Fig. 6).

 

CONCLUSION:

In summary, series of compounds containing disubstituted oxadiazole were prioritized and synthesized, based on molecular modeling studies. Compounds were prioritized based on quantitative and qualitative analysis. Qualitatative Analysis: Based on lean Moldock, Rerank and h bond scores. Quantitative Analysis: Based on overlay (on reference compound) and interaction with Arg 221 Lean values are calculated by dividing MolDock score, Rerank score &Hbond score with number of heavy atoms to find the contribution of each when binding to receptor. Molegro Virtual Docker1 was used for docking analysis. Novel oxadiazole series with di-substitution showed the better inhibition toward PTP1B. Compound 9 found to be the best among these disubstituted oxadiazole reported with 0.46 µmol/L in PTP1B enzyme assay. Also compound 9 improved glucose tolerance in OGTT which is comparable with Rosiglitazone. Further investigation of these derivatives with change of pharmacophore and in vitro assays of the disubstituted oxadiazole series are in progress and will be reported in due course.

 

ACKNOWLEDGEMENT:

The authors would like to thank management and staff of the Department of Pharmacology, Faculty of Pharmacy, KCTS’ R. G. Sapkal College of Pharmacy, Shri Neminath Jain Bramhacharyashram's Shriman Sureshdada Jain College of Pharmacy, Jain Gurukul, Chandwad, Nashik, 423101 Maharashtra, India for providing facility to carry out research work.

 

 

REFERENCES:

1.     Rizvi AA, Type 2 diabetes: epidemiologic trends, evolving pathogenetic [corrected] concepts, and recent changes in therapeutic approach, South. Med. J, 2004, 97(11):1079-87.

2.     Basu S, Uppuleti VP, et al Discovery of novel and potent heterocyclic carboxylic acid derivatives as protein tyrosine phosphatase 1B inhibitors, Bioorg. Med. Chem. Lett, 2012, 22: 2843.

3.     Blume-Jensen P, Hunter T, Oncogenic kinase signaling, Nature, 2001, 411(6835):355-65.

4.     Cook WS, Unger RH, Protein tyrosine phosphatase 1B: a potential leptin resistance factor of obesity, Dev. Cell, 2002, 2 (4): 385-7.

5.     Montalibet J, Kennedy BP,Therapeutic strategies for targeting PTB1B in diabetes, Drug Discovery Today Ther. Strateg, 2005, 2: 129-135.

6.     Elchebly M, Payette P, et alIncreased insulin sensitivity and obesity resistance in mice lacking the protein tyrosine phosphatase-1B gene, Science, 1999, 283(5407):1544-8.

7.     Klaman LD, Boss O, et al Increased energy expenditure, decreased adiposity, and tissue-specific insulin sensitivity in protein-tyrosine phosphatase 1B-deficient mice, Mol. Cell. Biol,2000, 20(15): 5479-89.

8.     Anderson HS, Iversen LF, et al 2-(oxalylamino)-benzoic acid is a general, competitive inhibitor of protein-tyrosine phosphatases, Biol. Chem, 2000, 275(10):7101-8.

9.     Burke TR Jr, Ye B, 4'-O-[2-(2-fluoromalonyl)]-L-tyrosine: a phosphotyrosyl mimic for the preparation of signal transduction inhibitory peptides J. Med. Chem, 1996, 39: 1021-1027.

10.   Bharat RB, Bhooshan K,et al Novel thiazolidinedione derivatives with anti-obesity effects: dual action as PTP1B inhibitors and PPAR-γ activators, Bioorg. Med. Chem. Lett, 2010, 20(22): 6758-63.

11.   Dipam P,Mukul J, et al Discovery of Orally Active, Potent, and Selective Benzotriazole-Based PTP1B Inhibitors, ChemMedChem 2011, 6 (6): 1011-1016.

12.   Shen K, Keng YF, et al Acquisition of a specific and potent PTP1B inhibitor from a novel combinatorial library and screening procedure, J. Biol. Chem, 2001, 276: 47311-47319.

13.   Szczepankiewicz BG, Liu G, et al Discovery of a potent, selective protein tyrosine phosphatase 1B inhibitor using a linked-fragment strategy, J. Am. Chem. Soc, 2003, 125: 4087-4096.

14.   Liu G, Xin Z, et al Selective protein tyrosine phosphatase 1B inhibitors: targeting the second phosphotyrosine binding site with non-carboxylic acid-containing ligands, J. Med. Chem,2003, 46: 3437-3440.

15.   Liu G, Xin Z, et al Fragment screening and assembly: a highly efficient approach to a selective and cell active protein tyrosine phosphatase 1B inhibitor, J. Med. Chem. 2003,  46: 4232-4235.

16.   Lau CK, Bayly CI, et al Structure-based design of a series of potent and selective nonpeptidic PTP-1B inhibitors, Bioorg. Med. Chem. Lett,2004, 14: 1043-1048.

17.   Iversen LF, Andersen HS, et al Structure-based design of a low molecular weight, nonphosphorus, nonpeptide, and highly selective inhibitor of protein-tyrosine phosphatase 1B, J. Biol. Chem, 2000, 275: 10300-10307.

18.   Reddy KA, Lohray BB, et al. Novel antidiabetic and hypolipidemic agents. 3. Benzofuran-containing thiazolidinediones, J Med Chem, 1999, 42: 1927–40.

19.   Willson TM, Brown PJ, et al The PPARs: from orphan receptors to drug discovery, J Med Chem, 2000, 43: 527–50.

20.   Costantino L, Rastelli G, et al Diabetes complications and their potential prevention: aldose reductase inhibition and other approaches, Med Res Rev, 1999, 19(1): 3–23.

21.   Malamas MS, Sredy J, et al. New azolidinediones as inhibitors of protein tyrosine phosphatase 1B with antihyperglycemic properties, J Med Chem, 2000, 43 (5): 995–1010.

22.   Liu Z, Huang Y, et al Soluble polymer-supported synthesis of 5-arylidene thiazolidinones and pyrimidinones using a novel traceless linker strategy, J Comb Chem, 2008, 10 (5): 632–6.

23.   Zhang L, Qian C, et al Discovery of novel PTP1B inhibitors with antihyperglycemic activity, ActaPharmacologicaSinica, 2010, 31 (8): 1005–1012.

24.   Thomsen R, Christensen MH, MolDock: a new technique for high-accuracy molecular docking, J. Med. Chem, 2006, 49 (11) 3315–3321.

25.   Zhang W, Hong Di,et al Ursolic acid and its derivative inhibit protein tyrosine phosphatase 1B, enhancing insulin receptor phosphorylation and stimulating glucose uptake, BiochimBiophysActa, 2006, 1760 (10): 1505–1512.

26.   Sebastian K, Chika IS, et al Reductive Cleavage of Amides to Alcohols and Amines Catalyzed by Well-Defined Bimetallic Molybdenum Complexes, Chemistry - A European Journal, 2012, 18(48): 15267-15271.

27.   PCT Int. Appl., 2008157844, 24 Dec 2008

28.   PCT Int. Appl., 2010021680, 25 Feb 2010

 

 

 

 

 

 

Received on 21.03.2014          Accepted on 28.04.2014        

© Asian Pharma Press All Right Reserved

Asian J. Pharm. Tech.  2014; Vol. 4: Issue 2, Pg 43-49